olfactory bulb
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Data Science In Olfaction
Agarwal, Vivek, Harvey, Joshua, Rinberg, Dmitry, Dhar, Vasant
Advances in neural sensing technology are making it possible to observe the olfactory process in great detail. In this paper, we conceptualize smell from a Data Science and AI perspective, that relates the properties of odorants to how they are sensed and analyzed in the olfactory system from the nose to the brain. Drawing distinctions to color vision, we argue that smell presents unique measurement challenges, including the complexity of stimuli, the high dimensionality of the sensory apparatus, as well as what constitutes ground truth. In the face of these challenges, we argue for the centrality of odorant-receptor interactions in developing a theory of olfaction. Such a theory is likely to find widespread industrial applications, and enhance our understanding of smell, and in the longer-term, how it relates to other senses and language. As an initial use case of the data, we present results using machine learning-based classification of neural responses to odors as they are recorded in the mouse olfactory bulb with calcium imaging.
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Demixing odors -- fast inference in olfaction Jeff Beck Gatsby Computational Neuroscience Unit Duke University UCL
The olfactory system faces a difficult inference problem: it has to determine what odors are present based on the distributed activation of its receptor neurons. Here we derive neural implementations of two approximate inference algorithms that could be used by the brain. One is a variational algorithm (which builds on the work of Beck.
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Interneurons accelerate learning dynamics in recurrent neural networks for statistical adaptation
Lipshutz, David, Pehlevan, Cengiz, Chklovskii, Dmitri B.
Early sensory systems in the brain rapidly adapt to fluctuating input statistics, which requires recurrent communication between neurons. Mechanistically, such recurrent communication is often indirect and mediated by local interneurons. In this work, we explore the computational benefits of mediating recurrent communication via interneurons compared with direct recurrent connections. To this end, we consider two mathematically tractable recurrent linear neural networks that statistically whiten their inputs -- one with direct recurrent connections and the other with interneurons that mediate recurrent communication. By analyzing the corresponding continuous synaptic dynamics and numerically simulating the networks, we show that the network with interneurons is more robust to initialization than the network with direct recurrent connections in the sense that the convergence time for the synaptic dynamics in the network with interneurons (resp. direct recurrent connections) scales logarithmically (resp. linearly) with the spectrum of their initialization. Our results suggest that interneurons are computationally useful for rapid adaptation to changing input statistics. Interestingly, the network with interneurons is an overparameterized solution of the whitening objective for the network with direct recurrent connections, so our results can be viewed as a recurrent linear neural network analogue of the implicit acceleration phenomenon observed in overparameterized feedforward linear neural networks.
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Chemosensory Processing in a Spiking Model of the Olfactory Bulb: Chemotopic Convergence and Center Surround Inhibition
This paper presents a neuromorphic model of two olfactory signal- processing primitives: chemotopic convergence of olfactory receptor neurons, and center on-off surround lateral inhibition in the olfactory bulb. A self-organizing model of receptor convergence onto glomeruli is used to generate a spatially organized map, an olfactory image. This map serves as input to a lattice of spiking neurons with lateral connections. The dynamics of this recurrent network transforms the initial olfactory image into a spatio-temporal pattern that evolves and stabilizes into odor- and intensity-coding attractors. The model is validated using experimental data from an array of temperature-modulated gas sensors.
Stunning drone footage captures a huge pod of dolphins off the coast of Florida
An armature drone photographer captured stunning footage of a dolphin pod swimming through the crystal-blue waters off the coast of Florida. Local restaurant owner Paul Dabill, 48, filmed approximately 50 dolphins while'looking for life to film' around Jupiter last week. The mesmerizing video shows the marine animals diving in and out of the sea and playing keep-away with a strand of sargassum seaweed. Dabill said he spent 30 minutes filing the pod, one of the largest he had seen. The clip was captured on January 18, when the skies were clear and the ocean was blue.
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The Doctor Will Sniff You Now - Issue 95: Escape
Times have changed, so you no longer have to endure an orifices check, a needle in your vein, and a week of waiting for your blood test results. Instead, the nurse welcomes you with, "The doctor will sniff you now," and takes you into an airtight chamber wired up to a massive computer. As you rest, the volatile molecules you exhale or emit from your body and skin slowly drift into the complex artificial intelligence apparatus, colloquially known as Deep Nose. Behind the scene, Deep Nose's massive electronic brain starts crunching through the molecules, comparing them to its enormous olfactory database. Once it's got a noseful, the AI matches your odors to the medical conditions that cause them and generates a printout of your health.
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